Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Gm42612-201ENSMUST00000197986 623 ntBASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Gm43170-201ENSMUST00000199827 612 ntBASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.24□□□□□ -0.61
Gm11127A7VMS2 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm26464-201ENSMUST00000157094 305 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm45841-201ENSMUST00000207700 164 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm6218-201ENSMUST00000219812 628 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm11127A7VMS2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm11127A7VMS2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms