Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gm24749-201ENSMUST00000157838 343 ntBASIC13.19□□□□□ -0.3
Scn1aA2APX8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm12015-201ENSMUST00000117065 843 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm14208-201ENSMUST00000119645 678 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm44262-201ENSMUST00000204969 372 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm29199-201ENSMUST00000187766 775 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm18304-201ENSMUST00000189162 546 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Gzmn-202ENSMUST00000225535 989 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.18□□□□□ -0.3
Scn1aA2APX8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn1aA2APX8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.17□□□□□ -0.3
Scn1aA2APX8 Gm9996-201ENSMUST00000070359 913 ntBASIC13.17□□□□□ -0.3
Scn1aA2APX8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.17□□□□□ -0.3
Scn1aA2APX8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms