Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm37935-201ENSMUST00000192012 982 ntBASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm6458-201ENSMUST00000211573 635 ntBASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm43051-201ENSMUST00000201096 2678 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm12151-201ENSMUST00000121374 290 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm38223-201ENSMUST00000194484 695 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm6210-201ENSMUST00000204734 1942 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm9755-201ENSMUST00000032981 1356 ntBASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm43677-201ENSMUST00000198098 2378 ntBASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.72□□□□□ -1.01
Trav13-4-dv7A0A075B6C2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms