Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Gm24526-201ENSMUST00000082921 158 ntBASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afb2S4R1M3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Gm38092-201ENSMUST00000195600 653 ntBASIC12.66□□□□□ -0.38
H2afb2S4R1M3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afb2S4R1M3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms