Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm43133-201ENSMUST00000197472 463 ntBASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm45930-201ENSMUST00000221330 292 ntBASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Mir8109-201ENSMUST00000184375 117 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm9257-201ENSMUST00000221254 232 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Snora73a-201ENSMUST00000082453 205 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl40Q9Z2Q5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm43118-201ENSMUST00000199149 775 ntBASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm3961-201ENSMUST00000204425 994 ntBASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm18935-201ENSMUST00000212692 664 ntBASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms