Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm12380-201ENSMUST00000119012 544 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm18056-201ENSMUST00000207670 568 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm18061-201ENSMUST00000208350 562 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm18063-201ENSMUST00000208529 568 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Gm18052-201ENSMUST00000208750 559 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn8aQ9WTU3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms