Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm22594-201ENSMUST00000104251 130 ntBASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm14892-201ENSMUST00000117636 267 ntBASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm29763-201ENSMUST00000205306 616 ntBASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm44506-201ENSMUST00000206278 965 ntBASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm11578-201ENSMUST00000118530 459 ntBASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm14213-201ENSMUST00000119778 768 ntBASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a4Q9QZR9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm12453-201ENSMUST00000121981 331 ntBASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.34□□□□□ -0.43
Col4a4Q9QZR9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms