Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm12058-201ENSMUST00000118614 437 ntBASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm3961-201ENSMUST00000204425 994 ntBASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf3Q9QXK7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm2546-201ENSMUST00000182630 991 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Mir6420-201ENSMUST00000185032 102 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm43758-201ENSMUST00000199500 367 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm43822-201ENSMUST00000200285 476 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf3Q9QXK7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Gm21769-201ENSMUST00000211922 111 ntBASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Gm5950-201ENSMUST00000213337 772 ntBASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf3Q9QXK7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms