Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm6222-202ENSMUST00000182143 629 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpne8Q9DC53 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Gm12390-201ENSMUST00000117897 397 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Gm14921-201ENSMUST00000118643 908 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cpne8Q9DC53 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Gm15703-201ENSMUST00000120250 880 ntBASIC13.17□□□□□ -0.3
Cpne8Q9DC53 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms