Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp5Q9D7S9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Mir7023-201ENSMUST00000185093 64 ntBASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp5Q9D7S9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm27390-201ENSMUST00000184516 176 ntBASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Gm44855-201ENSMUST00000205725 362 ntBASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Map1b-203ENSMUST00000223725 2669 ntBASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp5Q9D7S9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms