Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm44344-201ENSMUST00000200287 129 ntBASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm43703-201ENSMUST00000200523 763 ntBASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim42Q9D2H5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm14767-201ENSMUST00000121559 586 ntBASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms