Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Shmt2Q9CZN7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms