Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ddx47Q9CWX9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Gm42550-201ENSMUST00000201553 960 ntBASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx47Q9CWX9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx47Q9CWX9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx47Q9CWX9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Gm15920-201ENSMUST00000118998 402 ntBASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx47Q9CWX9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms