Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1aQ9CU62 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Smc1aQ9CU62 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1aQ9CU62 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Smc1aQ9CU62 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Gm22018-201ENSMUST00000104357 131 ntBASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Gm42627-201ENSMUST00000197347 224 ntBASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1aQ9CU62 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.19□□□□□ -0.14
Smc1aQ9CU62 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm13369-201ENSMUST00000119442 987 ntBASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm27501-201ENSMUST00000183599 107 ntBASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Mir8109-201ENSMUST00000184375 117 ntBASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm37922-201ENSMUST00000195596 455 ntBASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1aQ9CU62 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms