Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Gm5950-201ENSMUST00000213337 772 ntBASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm7Q9CQQ8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm15547-201ENSMUST00000122152 333 ntBASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm17376-201ENSMUST00000166016 84 ntBASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.79□□□□□ -0.36
Lsm7Q9CQQ8 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms