Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm24398-201ENSMUST00000157870 109 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm6390-201ENSMUST00000215034 589 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm18367-201ENSMUST00000176139 600 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm5257-201ENSMUST00000121823 790 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm23119-201ENSMUST00000158610 140 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Mir6941-201ENSMUST00000184711 59 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm19587-201ENSMUST00000191395 545 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh23Q99PF4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm25766-201ENSMUST00000104101 131 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm5805-201ENSMUST00000072779 456 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm12663-201ENSMUST00000118481 958 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm18776-201ENSMUST00000188833 654 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Trav11n-201ENSMUST00000200113 343 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms