Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Gm4868-201ENSMUST00000164138 789 ntBASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Gm37246-201ENSMUST00000192665 835 ntBASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Gm32025-201ENSMUST00000217960 307 ntBASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col25a1Q99MQ5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col25a1Q99MQ5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Col25a1Q99MQ5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col25a1Q99MQ5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col25a1Q99MQ5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm23949-201ENSMUST00000104027 127 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm14274-201ENSMUST00000117182 615 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm15770-201ENSMUST00000117498 584 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm11451-201ENSMUST00000118946 630 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm12516-201ENSMUST00000120819 385 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm13182-201ENSMUST00000122241 312 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm10312-201ENSMUST00000078515 489 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col25a1Q99MQ5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Gm14219-201ENSMUST00000120414 288 ntBASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms