Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm29667-201ENSMUST00000190817 490 ntBASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm10576-201ENSMUST00000191927 825 ntBASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Mir339-201ENSMUST00000083659 96 ntBASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm24694-201ENSMUST00000180054 110 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm27663-201ENSMUST00000184839 110 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm6983-201ENSMUST00000214912 628 ntBASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Thumpd1Q99J36 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gm13689-201ENSMUST00000119360 685 ntBASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Mir7684-201ENSMUST00000183858 60 ntBASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gm27702-201ENSMUST00000184512 56 ntBASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms