Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm24231-201ENSMUST00000104315 133 ntBASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm14760-201ENSMUST00000121831 999 ntBASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm13316-201ENSMUST00000140537 691 ntBASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm38158-201ENSMUST00000194617 339 ntBASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha9Q91Y11 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm10434-201ENSMUST00000101158 471 ntBASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm13736-201ENSMUST00000119272 253 ntBASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Mospd4-201ENSMUST00000180618 576 ntBASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm27572-201ENSMUST00000183702 255 ntBASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm43118-201ENSMUST00000199149 775 ntBASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha9Q91Y11 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha9Q91Y11 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Gm11793-201ENSMUST00000120433 981 ntBASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms