Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Gm11918-201ENSMUST00000121660 179 ntBASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Daam2-202ENSMUST00000224595 1926 ntBASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Gm6745-201ENSMUST00000199216 526 ntBASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb4Q91XZ6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms