Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Gm24526-201ENSMUST00000082921 158 ntBASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb11Q91UZ8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb11Q91UZ8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm12502-201ENSMUST00000120197 444 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm8738-201ENSMUST00000172606 329 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm19184-201ENSMUST00000196798 928 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm19309-201ENSMUST00000218295 205 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb11Q91UZ8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms