Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm14130-201ENSMUST00000118417 987 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm14832-201ENSMUST00000121289 322 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm23958-201ENSMUST00000157207 105 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TraipQ8VIG6 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.55□□□□□ -0.24
TraipQ8VIG6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm24845-201ENSMUST00000158034 109 ntBASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm25025-201ENSMUST00000175018 111 ntBASIC13.54□□□□□ -0.24
TraipQ8VIG6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm28882-201ENSMUST00000185504 314 ntBASIC13.54□□□□□ -0.24
TraipQ8VIG6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm18212-201ENSMUST00000211678 889 ntBASIC13.54□□□□□ -0.24
TraipQ8VIG6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.54□□□□□ -0.24
TraipQ8VIG6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.54□□□□□ -0.24
TraipQ8VIG6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TraipQ8VIG6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.53□□□□□ -0.24
TraipQ8VIG6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Gm12997-201ENSMUST00000120207 640 ntBASIC13.53□□□□□ -0.24
TraipQ8VIG6 Gm11597-201ENSMUST00000121423 964 ntBASIC13.53□□□□□ -0.24
TraipQ8VIG6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms