Protein–RNA interactions for Protein: Q8VCH8

Ubxn4, UBX domain-containing protein 4, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn4Q8VCH8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Mir6956-201ENSMUST00000183598 62 ntBASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Gm27390-201ENSMUST00000184516 176 ntBASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Gm28693-202ENSMUST00000190758 331 ntBASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubxn4Q8VCH8 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Gm14921-201ENSMUST00000118643 908 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Gm10576-201ENSMUST00000191927 825 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubxn4Q8VCH8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Gm12341-201ENSMUST00000119724 503 ntBASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubxn4Q8VCH8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms