Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ndc1Q8VCB1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm10434-201ENSMUST00000101158 471 ntBASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm14381-201ENSMUST00000122105 414 ntBASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm13316-201ENSMUST00000140537 691 ntBASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndc1Q8VCB1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gm26083-201ENSMUST00000157904 193 ntBASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gm8099-201ENSMUST00000200510 742 ntBASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms