Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm12203-201ENSMUST00000118235 598 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm12209-201ENSMUST00000120089 596 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm14760-201ENSMUST00000121831 999 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm17208-201ENSMUST00000168388 535 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm9908-201ENSMUST00000211534 448 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Pck2-205ENSMUST00000226352 2784 ntBASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm1Q8VC85 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm14928-201ENSMUST00000120198 477 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm2231-201ENSMUST00000125661 612 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm10012-201ENSMUST00000078252 192 ntBASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Lsm1Q8VC85 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Daam2-202ENSMUST00000224595 1926 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms