Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Gm43133-201ENSMUST00000197472 463 ntBASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Gm43630-201ENSMUST00000201550 776 ntBASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Gm9823-201ENSMUST00000051212 327 ntBASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sf3a1Q8K4Z5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sf3a1Q8K4Z5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm13492-201ENSMUST00000119772 665 ntBASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm38158-201ENSMUST00000194617 339 ntBASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm42693-201ENSMUST00000196779 631 ntBASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sf3a1Q8K4Z5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms