Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Gm43778-201ENSMUST00000199438 199 ntBASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Gm9785-201ENSMUST00000062642 1006 ntBASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 n-R5s211-201ENSMUST00000093689 119 ntBASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ddx54Q8K4L0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Gm12857-201ENSMUST00000117678 592 ntBASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Gm11980-201ENSMUST00000121445 986 ntBASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Gm28388-201ENSMUST00000186262 437 ntBASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Gm2965-201ENSMUST00000198365 343 ntBASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Gm9139-201ENSMUST00000218817 700 ntBASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ddx54Q8K4L0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gm14724-201ENSMUST00000118400 537 ntBASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gm22442-201ENSMUST00000157256 144 ntBASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Mir6923-201ENSMUST00000184592 72 ntBASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gm5298-201ENSMUST00000201122 892 ntBASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 AC126799.1-201ENSMUST00000221976 246 ntBASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx54Q8K4L0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Gm19640-201ENSMUST00000214849 464 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms