Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Gm15806-201ENSMUST00000120696 955 ntBASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Gm5896-201ENSMUST00000189662 1024 ntBASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Gm19184-201ENSMUST00000196798 928 ntBASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Gm4768-201ENSMUST00000206199 686 ntBASIC15□□□□□ -0.01
Cchcr1Q8K2I2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Gm10146-201ENSMUST00000072739 309 ntBASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Gm38157-201ENSMUST00000194178 1698 ntBASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Snord83b-201ENSMUST00000104546 94 ntBASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Gm27486-201ENSMUST00000184923 80 ntBASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cchcr1Q8K2I2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Gm15703-201ENSMUST00000120250 880 ntBASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Gm8652-201ENSMUST00000181363 964 ntBASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms