Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm12997-201ENSMUST00000120207 640 ntBASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm45186-201ENSMUST00000206874 478 ntBASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.38■□□□□ 0.21
Rab11fip3Q8CHD8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm24231-201ENSMUST00000104315 133 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm18304-201ENSMUST00000189162 546 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Rprl1-202ENSMUST00000198476 238 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rab11fip3Q8CHD8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip3Q8CHD8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms