Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Gm26185-201ENSMUST00000157692 266 ntBASIC11.29□□□□□ -0.6
ShfQ8CG80 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.29□□□□□ -0.6
ShfQ8CG80 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.29□□□□□ -0.6
ShfQ8CG80 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ShfQ8CG80 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.29□□□□□ -0.6
ShfQ8CG80 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.29□□□□□ -0.6
ShfQ8CG80 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.28□□□□□ -0.6
ShfQ8CG80 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm18018-201ENSMUST00000198273 408 ntBASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm42599-201ENSMUST00000201308 469 ntBASIC11.28□□□□□ -0.6
ShfQ8CG80 Gm35960-201ENSMUST00000202712 767 ntBASIC11.28□□□□□ -0.6
ShfQ8CG80 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.28□□□□□ -0.6
ShfQ8CG80 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.28□□□□□ -0.6
ShfQ8CG80 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ShfQ8CG80 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
ShfQ8CG80 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ShfQ8CG80 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ShfQ8CG80 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ShfQ8CG80 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ShfQ8CG80 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.27□□□□□ -0.6
ShfQ8CG80 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ShfQ8CG80 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ShfQ8CG80 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
ShfQ8CG80 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms