Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm12390-201ENSMUST00000117897 397 ntBASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Gm13123-201ENSMUST00000122173 492 ntBASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Mir1894-201ENSMUST00000122802 81 ntBASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vcpip1Q8CDG3 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Gm6244-201ENSMUST00000178732 841 ntBASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Gm17794-201ENSMUST00000220252 955 ntBASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms