Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gm23363-201ENSMUST00000175024 79 ntBASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gm26927-201ENSMUST00000182385 965 ntBASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf3Q8C120 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf3Q8C120 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Gm11425-201ENSMUST00000119608 498 ntBASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Gm6222-202ENSMUST00000182143 629 ntBASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Gm27731-201ENSMUST00000185192 107 ntBASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Gm9396-201ENSMUST00000076703 567 ntBASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf3Q8C120 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh3rf3Q8C120 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms