Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm14130-201ENSMUST00000118417 987 ntBASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm13315-201ENSMUST00000120376 991 ntBASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm13665-201ENSMUST00000120830 528 ntBASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf2Q8BZT2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Gm13570-201ENSMUST00000140763 309 ntBASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf2Q8BZT2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sh3rf2Q8BZT2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Sh3rf2Q8BZT2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh3rf2Q8BZT2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Sh3rf2Q8BZT2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
Sh3rf2Q8BZT2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms