Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.8■□□□□ 0.44
Usp47Q8BY87 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Gm44958-201ENSMUST00000203734 736 ntBASIC17.8■□□□□ 0.44
Usp47Q8BY87 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.8■□□□□ 0.44
Usp47Q8BY87 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp47Q8BY87 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Gm10312-201ENSMUST00000078515 489 ntBASIC17.8■□□□□ 0.44
Usp47Q8BY87 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.8■□□□□ 0.44
Usp47Q8BY87 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp47Q8BY87 Gm24934-201ENSMUST00000103764 111 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm2383-201ENSMUST00000181461 807 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 AC126262.1-201ENSMUST00000221802 1904 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm13142-201ENSMUST00000117213 1453 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm45266-201ENSMUST00000210111 2173 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm6963-201ENSMUST00000147879 379 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp47Q8BY87 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp47Q8BY87 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Usp47Q8BY87 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms