Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm25880-201ENSMUST00000104331 132 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm6771-201ENSMUST00000182716 1001 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm37458-201ENSMUST00000194055 410 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm8956-201ENSMUST00000203939 825 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm12579-201ENSMUST00000118040 783 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm15352-201ENSMUST00000118696 270 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Gm44329-201ENSMUST00000197469 112 ntBASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col16a1Q8BLX7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm3765-201ENSMUST00000130985 1447 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm11956-201ENSMUST00000119525 512 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm13263-201ENSMUST00000121271 838 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm23218-201ENSMUST00000158124 276 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm9797-202ENSMUST00000218003 294 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Gm5705-201ENSMUST00000066241 711 ntBASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col16a1Q8BLX7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Gm25951-201ENSMUST00000175330 64 ntBASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Gm19166-201ENSMUST00000196041 1063 ntBASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms