Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Gm25261-201ENSMUST00000157416 134 ntBASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Snora78-201ENSMUST00000158630 128 ntBASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Gm25927-201ENSMUST00000175058 117 ntBASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fam53bQ8BGR5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fam53bQ8BGR5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Gm7809-201ENSMUST00000153199 742 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Gm26035-201ENSMUST00000083065 308 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fam53bQ8BGR5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms