Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm15321-201ENSMUST00000121290 288 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm13689-201ENSMUST00000119360 685 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm19220-201ENSMUST00000222682 803 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim6Q8BGE7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gm11978-201ENSMUST00000122315 466 ntBASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim6Q8BGE7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim6Q8BGE7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim6Q8BGE7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim6Q8BGE7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trim6Q8BGE7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim6Q8BGE7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim6Q8BGE7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms