Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm14644-201ENSMUST00000116671 647 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm12314-201ENSMUST00000118104 538 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm44100-201ENSMUST00000204329 436 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm17812-201ENSMUST00000204935 318 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm45598-202ENSMUST00000210719 986 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm14267-206ENSMUST00000226870 1209 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14□□□□□ -0.17
Usp6nlQ80XC3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Gm12266-201ENSMUST00000120311 962 ntBASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Gm11597-201ENSMUST00000121423 964 ntBASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 AU022133-201ENSMUST00000200601 873 ntBASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp6nlQ80XC3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp6nlQ80XC3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms