Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.79□□□□□ -0.52
Pif1Q80SX8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm14704-201ENSMUST00000120300 874 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm15276-201ENSMUST00000145953 498 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Mir3547-201ENSMUST00000175461 88 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm18212-201ENSMUST00000211678 889 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm5950-201ENSMUST00000213337 772 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm18041-201ENSMUST00000218210 618 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pif1Q80SX8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pif1Q80SX8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.78□□□□□ -0.52
Pif1Q80SX8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pif1Q80SX8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.77□□□□□ -0.53
Pif1Q80SX8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm2260-201ENSMUST00000184965 657 ntBASIC11.77□□□□□ -0.53
Pif1Q80SX8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm8099-201ENSMUST00000200510 742 ntBASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pif1Q80SX8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pif1Q80SX8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms