Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm8018-201ENSMUST00000173536 789 ntBASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm43118-201ENSMUST00000199149 775 ntBASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf139Q7TMV1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Gm11793-201ENSMUST00000120433 981 ntBASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Gm13316-201ENSMUST00000140537 691 ntBASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf139Q7TMV1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Mir1247-201ENSMUST00000116706 82 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gm14760-201ENSMUST00000121831 999 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Rmrp-201ENSMUST00000157463 271 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gm44405-201ENSMUST00000198952 126 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gm45925-201ENSMUST00000218882 744 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Gm45930-201ENSMUST00000221330 292 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf139Q7TMV1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms