Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Gm22144-201ENSMUST00000157402 102 ntBASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Gm44999-201ENSMUST00000207456 1493 ntBASIC16.24■□□□□ 0.19
Chd4Q6PDQ2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Mir7677-201ENSMUST00000184226 67 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm5733-201ENSMUST00000190232 939 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm6905-201ENSMUST00000205729 511 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm44980-201ENSMUST00000205826 314 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gm10152-201ENSMUST00000193475 1344 ntBASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd4Q6PDQ2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Gm44882-201ENSMUST00000205702 802 ntBASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chd4Q6PDQ2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms