Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Gm27839-201ENSMUST00000184242 106 ntBASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Gm8099-201ENSMUST00000200510 742 ntBASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snx6Q6P8X1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Snx6Q6P8X1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm7653-201ENSMUST00000214567 508 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm10146-201ENSMUST00000072739 309 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Mir339-201ENSMUST00000083659 96 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.14□□□□□ -0.47
Snx6Q6P8X1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snx6Q6P8X1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snx6Q6P8X1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms