Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mre11Q61216 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Gm15991-202ENSMUST00000212123 3565 ntBASIC15.22■□□□□ 0.03
Mre11Q61216 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.22■□□□□ 0.03
Mre11Q61216 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mre11Q61216 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Mre11Q61216 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mre11Q61216 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.21■□□□□ 0.03
Mre11Q61216 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mre11Q61216 Gm14542-201ENSMUST00000118460 1248 ntBASIC15.21■□□□□ 0.03
Mre11Q61216 Gm6447-201ENSMUST00000118905 835 ntBASIC15.21■□□□□ 0.03
Mre11Q61216 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.21■□□□□ 0.03
Mre11Q61216 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC15.21■□□□□ 0.03
Mre11Q61216 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Mre11Q61216 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mre11Q61216 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.21■□□□□ 0.03
Mre11Q61216 AC114573.1-201ENSMUST00000224120 1210 ntBASIC15.21■□□□□ 0.03
Mre11Q61216 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mre11Q61216 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mre11Q61216 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mre11Q61216 Gm45776-201ENSMUST00000212366 1522 ntBASIC15.21■□□□□ 0.03
Mre11Q61216 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mre11Q61216 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Mre11Q61216 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mre11Q61216 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Mre11Q61216 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Mre11Q61216 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mre11Q61216 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mre11Q61216 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Mre11Q61216 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Mir686-201ENSMUST00000102174 109 ntBASIC15.2■□□□□ 0.02
Mre11Q61216 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Mre11Q61216 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.2■□□□□ 0.02
Mre11Q61216 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm27494-201ENSMUST00000184735 189 ntBASIC15.2■□□□□ 0.02
Mre11Q61216 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Mre11Q61216 Chchd1-203ENSMUST00000224633 557 ntBASIC15.2■□□□□ 0.02
Mre11Q61216 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.2■□□□□ 0.02
Mre11Q61216 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mre11Q61216 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC15.2■□□□□ 0.02
Mre11Q61216 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mre11Q61216 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mre11Q61216 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.19■□□□□ 0.02
Mre11Q61216 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Mre11Q61216 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15.19■□□□□ 0.02
Mre11Q61216 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mre11Q61216 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms