Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm12453-201ENSMUST00000121981 331 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm16305-201ENSMUST00000140747 556 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.19□□□□□ -0.46
Col12a1Q60847 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Mir326-201ENSMUST00000083637 95 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Gm8731-201ENSMUST00000118088 412 ntBASIC12.18□□□□□ -0.46
Col12a1Q60847 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.18□□□□□ -0.46
Col12a1Q60847 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.18□□□□□ -0.46
Col12a1Q60847 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col12a1Q60847 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col12a1Q60847 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col12a1Q60847 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 BC106175-202ENSMUST00000219344 1213 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm12036-201ENSMUST00000120008 530 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm17070-201ENSMUST00000170463 784 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 Gm9797-202ENSMUST00000218003 294 ntBASIC12.17□□□□□ -0.46
Col12a1Q60847 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.17□□□□□ -0.46
Col12a1Q60847 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.17□□□□□ -0.46
Col12a1Q60847 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col12a1Q60847 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms