Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim38Q5SZ99 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.17□□□□□ -0.3
Trim38Q5SZ99 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gm12363-201ENSMUST00000122250 668 ntBASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim38Q5SZ99 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm32025-201ENSMUST00000217960 307 ntBASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim38Q5SZ99 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim38Q5SZ99 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trim38Q5SZ99 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim38Q5SZ99 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms