Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav5d-4Q5R1F6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5d-4Q5R1F6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Trav5d-4Q5R1F6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5d-4Q5R1F6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav5d-4Q5R1F6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5d-4Q5R1F6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gm22121-201ENSMUST00000175148 54 ntBASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gm7561-201ENSMUST00000211203 886 ntBASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5d-4Q5R1F6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm11424-201ENSMUST00000121929 829 ntBASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm29649-201ENSMUST00000185649 419 ntBASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav5d-4Q5R1F6 Gm8099-201ENSMUST00000200510 742 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms