Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gm13823-201ENSMUST00000119930 345 ntBASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gm29741-201ENSMUST00000192667 421 ntBASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gm18027-201ENSMUST00000218947 619 ntBASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3-3Q5R1C3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trav3-3Q5R1C3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms