Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h1Q4VGL6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm13570-201ENSMUST00000140763 309 ntBASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm45186-201ENSMUST00000206874 478 ntBASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rc3h1Q4VGL6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm12997-201ENSMUST00000120207 640 ntBASIC14.63□□□□□ -0.07
Rc3h1Q4VGL6 Gm14832-201ENSMUST00000121289 322 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms