Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Gm13875-201ENSMUST00000120162 282 ntBASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.2□□□□□ -0.14
Palb2Q3U0P1 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Palb2Q3U0P1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm13611-201ENSMUST00000118269 318 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm11978-201ENSMUST00000122315 466 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm8885-201ENSMUST00000189382 598 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm18041-201ENSMUST00000218210 618 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.19□□□□□ -0.14
Palb2Q3U0P1 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Snord83b-201ENSMUST00000104546 94 ntBASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.18□□□□□ -0.14
Palb2Q3U0P1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms