Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm8227-201ENSMUST00000223306 571 ntBASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cul4aQ3TCH7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm24231-201ENSMUST00000104315 133 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm12203-201ENSMUST00000118235 598 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm12209-201ENSMUST00000120089 596 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Auts2-212ENSMUST00000178555 309 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm24196-201ENSMUST00000179161 110 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm32025-201ENSMUST00000217960 307 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cul4aQ3TCH7 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm5866-201ENSMUST00000177881 973 ntBASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms